조현아

random policy

import os
import fire
import json
from pprint import pprint
import pickle
import random
import numpy as np
import cv2
import torch
import torch.nn as nn
from torchvision.utils import save_image
import torchvision.transforms as transforms
from transforms import *
from utils import *
# command
# python getRDAugmented_saveimg.py --model_path='logs/April_26_17:36:17_NL_resnet50__None'
DEFALUT_CANDIDATES = [
ShearXY,
TranslateXY,
# Rotate,
AutoContrast,
# Invert,
# Equalize, # Histogram Equalize --> white tumor
# Solarize,
Posterize,
Contrast,
# Color,
Brightness,
Sharpness,
Cutout
]
def get_next_subpolicy(transform_candidates = DEFALUT_CANDIDATES, op_per_subpolicy=2):
if not transform_candidates:
transform_candidates = DEFALUT_CANDIDATES
n_candidates = len(transform_candidates)
subpolicy = []
for i in range(op_per_subpolicy):
indx = random.randrange(n_candidates)
prob = random.random()
mag = random.random()
subpolicy.append(transform_candidates[indx](prob, mag))
subpolicy = transforms.Compose([
transforms.Pad(4),
transforms.RandomHorizontalFlip(),
*subpolicy,
transforms.Resize([240, 240]),
transforms.ToTensor()
])
return subpolicy
def eval(model_path):
print('\n[+] Parse arguments')
kwargs_path = os.path.join(model_path, 'kwargs.json')
kwargs = json.loads(open(kwargs_path).read())
args, kwargs = parse_args(kwargs)
pprint(args)
device = torch.device('cuda' if args.use_cuda else 'cpu')
cp_path = os.path.join(model_path, 'augmentation.cp')
print('\n[+] Load transform')
# list to tensor
aug_transform_list = []
for i in range (16):
aug_transform_list.append(get_next_subpolicy(DEFALUT_CANDIDATES))
transform = transforms.RandomChoice(aug_transform_list)
print(transform)
"""
print('\n[+] Load dataset')
dataset = get_dataset(args, transform, 'train')
loader = iter(get_aug_dataloader(args, dataset))
print('\n[+] Save 1 random policy')
save_dir = os.path.join(model_path, 'RD_aug_synthesized')
if not os.path.exists(save_dir):
os.makedirs(save_dir)
# non lesion
normal_dir = '/root/volume/2016104167/data/MICCAI_BraTS_2019_Data_Training/NonLesion_flair_frame_all'
for i, (image, target) in enumerate(loader):
image = image.view(240, 240)
# get random normal brain img
nor_file = random.choice(os.listdir(normal_dir))
nor_img = cv2.imread(os.path.join(normal_dir, nor_file), cv2.IMREAD_GRAYSCALE)
# print(nor_img.shape) # (256, 224)
nor_img = cv2.resize(nor_img, (240, 240))
# synthesize
image = np.asarray(image)
image_255 = image * 255
image_255[image_255 < 10] = 0
nor_img[image_255 > 10] = 0
syn_image = nor_img + image_255
# save synthesized img
cv2.imwrite(os.path.join(save_dir, 'aug_'+ str(i) + '.png'), syn_image)
if((i+1) % 1000 == 0):
print("\n saved images: ", i)
break
print('\n[+] Finished to save')
"""
if __name__ == '__main__':
fire.Fire(eval)
......@@ -25,12 +25,12 @@ from networks import basenet, grayResNet2
DATASET_PATH = '/content/drive/My Drive/CD2 Project/'
TRAIN_DATASET_PATH = '/content/drive/My Drive/CD2 Project/data/nonaug+Normal_train/'
TRAIN_TARGET_PATH = '/content/drive/My Drive/CD2 Project/data/train_nonaug_classify_target.csv'
VAL_DATASET_PATH = '/content/drive/My Drive/CD2 Project/data/nonaug+Normal_val/'
VAL_TARGET_PATH = '/content/drive/My Drive/CD2 Project/data/val_nonaug_classify_target.csv'
TEST_DATASET_PATH = '/content/drive/My Drive/CD2 Project/data/nonaug+Normal_test/'
TEST_TARGET_PATH = '/content/drive/My Drive/CD2 Project/data/test_nonaug_classify_target.csv'
TRAIN_DATASET_PATH = '/content/drive/My Drive/CD2 Project/data/classification data/aug&HGG+NL_train/'
TRAIN_TARGET_PATH = '/content/drive/My Drive/CD2 Project/data/classification data/train_augNL_classify_target.csv'
VAL_DATASET_PATH = '/content/drive/My Drive/CD2 Project/data/classification data/NL+HGG_val/'
VAL_TARGET_PATH = '/content/drive/My Drive/CD2 Project/data/classification data/val_nonaugNL_classify_target.csv'
TEST_DATASET_PATH = '/content/drive/My Drive/CD2 Project/data/classification data/NL+HGG_test/'
TEST_TARGET_PATH = '/content/drive/My Drive/CD2 Project/data/classification data/test_nonaugNL_classify_target.csv'
current_epoch = 0
......